PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do009273.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

bZIP

Protein Properties

Length: 148aa MW: 16259.5 Da PI: 9.5884

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do009273.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.8	2.7e-09	64	109	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r rr+++NRe+A+rsR+RK+ ++eL+ +++Le +++L+ + + Do009273.1 64 RRLRRRISNRESAQRSRARKQRCLDELRGSAAVLERRRRELAARTQ 109 799************************************9998766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-8	60	124	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.611	62	119	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.25E-8	64	117	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.4E-7	64	116	No hit	No description
PROSITE pattern	PS00036	0	67	82	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence Send to blast
MAFPDYCMDV HVFQFPAMSP PQLGFGSEEP TASPFPTETL PVASSPEVEA AADALAAECV 60 VDERRLRRRI SNRESAQRSR ARKQRCLDEL RGSAAVLERR RRELAARTQA ARSRLALVRL 120 ANAGLRAEAA ALSRRLADIE QTIASLIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	102	ERRRRE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004986317.1	8e-30	PREDICTED: ocs element-binding factor 1-like
TrEMBL	K4AKY0	5e-26	K4AKY0_SETIT; Uncharacterized protein
STRING	Si039558m	1e-25	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20974	5	7